Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-3Q5R1C3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-3Q5R1C3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-3Q5R1C3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-3Q5R1C3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-3Q5R1C3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-3Q5R1C3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-3Q5R1C3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-3Q5R1C3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-3Q5R1C3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-3Q5R1C3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-3Q5R1C3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav3-3Q5R1C3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Gm45444-201ENSMUST00000211394 898 ntBASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav3-3Q5R1C3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav3-3Q5R1C3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14□□□□□ -0.17
Trav3-3Q5R1C3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-3Q5R1C3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav3-3Q5R1C3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-3Q5R1C3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14□□□□□ -0.17
Trav3-3Q5R1C3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-3Q5R1C3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms