Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf43Q5NCP0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf43Q5NCP0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf43Q5NCP0 Gm11249-201ENSMUST00000117071 859 ntBASIC19.09■□□□□ 0.65
Rnf43Q5NCP0 Gm715-201ENSMUST00000117865 831 ntBASIC19.09■□□□□ 0.65
Rnf43Q5NCP0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf43Q5NCP0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf43Q5NCP0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf43Q5NCP0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf43Q5NCP0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf43Q5NCP0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Rnf43Q5NCP0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf43Q5NCP0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf43Q5NCP0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf43Q5NCP0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf43Q5NCP0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf43Q5NCP0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.08■□□□□ 0.64
Rnf43Q5NCP0 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.08■□□□□ 0.64
Rnf43Q5NCP0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf43Q5NCP0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf43Q5NCP0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf43Q5NCP0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 Gm10698-201ENSMUST00000182663 604 ntBASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf43Q5NCP0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rnf43Q5NCP0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf43Q5NCP0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf43Q5NCP0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf43Q5NCP0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf43Q5NCP0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.04■□□□□ 0.64
Rnf43Q5NCP0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Rnf43Q5NCP0 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.04■□□□□ 0.64
Rnf43Q5NCP0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf43Q5NCP0 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.04■□□□□ 0.64
Rnf43Q5NCP0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rnf43Q5NCP0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf43Q5NCP0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Rnf43Q5NCP0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms