Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.55■□□□□ 0.56
Scn2bQ56A07 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.54■□□□□ 0.56
Scn2bQ56A07 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2bQ56A07 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2bQ56A07 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2bQ56A07 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2bQ56A07 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2bQ56A07 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2bQ56A07 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2bQ56A07 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2bQ56A07 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2bQ56A07 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Scn2bQ56A07 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2bQ56A07 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2bQ56A07 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Scn2bQ56A07 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2bQ56A07 Gm26833-201ENSMUST00000180899 440 ntBASIC18.53■□□□□ 0.56
Scn2bQ56A07 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2bQ56A07 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2bQ56A07 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2bQ56A07 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Scn2bQ56A07 Rarb-207ENSMUST00000225921 2756 ntBASIC18.53■□□□□ 0.56
Scn2bQ56A07 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn2bQ56A07 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn2bQ56A07 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn2bQ56A07 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn2bQ56A07 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn2bQ56A07 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn2bQ56A07 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.52■□□□□ 0.56
Scn2bQ56A07 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn2bQ56A07 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Scn2bQ56A07 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.52■□□□□ 0.56
Scn2bQ56A07 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn2bQ56A07 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn2bQ56A07 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scn2bQ56A07 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2bQ56A07 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Grk6-206ENSMUST00000224995 2971 ntBASIC18.5■□□□□ 0.55
Scn2bQ56A07 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Scn2bQ56A07 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.5■□□□□ 0.55
Scn2bQ56A07 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Smad6-203ENSMUST00000179458 273 ntBASIC18.49■□□□□ 0.55
Scn2bQ56A07 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn2bQ56A07 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn2bQ56A07 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms