Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc2Q4U2R1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Gm37292-201ENSMUST00000192062 758 ntBASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Gm5186-201ENSMUST00000218781 920 ntBASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Gm21559-201ENSMUST00000220638 855 ntBASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc2Q4U2R1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.33□□□□□ -0.6
Herc2Q4U2R1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Herc2Q4U2R1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Gm29518-201ENSMUST00000190858 372 ntBASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Herc2Q4U2R1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Auts2-212ENSMUST00000178555 309 ntBASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc2Q4U2R1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms