Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 BC021767-201ENSMUST00000126387 1716 ntBASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Gm8495-201ENSMUST00000188740 694 ntBASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne3Q4FZC9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Syne3Q4FZC9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Syne3Q4FZC9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Syne3Q4FZC9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Syne3Q4FZC9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Syne3Q4FZC9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Syne3Q4FZC9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Syne3Q4FZC9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Syne3Q4FZC9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.83■□□□□ 0.76
Syne3Q4FZC9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Syne3Q4FZC9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Syne3Q4FZC9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Syne3Q4FZC9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne3Q4FZC9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.81■□□□□ 0.76
Syne3Q4FZC9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
Syne3Q4FZC9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne3Q4FZC9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne3Q4FZC9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Syne3Q4FZC9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne3Q4FZC9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne3Q4FZC9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Gm42642-201ENSMUST00000200683 355 ntBASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne3Q4FZC9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.79■□□□□ 0.76
Syne3Q4FZC9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Syne3Q4FZC9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms