Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Trim80Q3V061 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.29■□□□□ 0.68
Trim80Q3V061 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim80Q3V061 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim80Q3V061 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim80Q3V061 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.29■□□□□ 0.68
Trim80Q3V061 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim80Q3V061 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim80Q3V061 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim80Q3V061 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim80Q3V061 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim80Q3V061 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Trim80Q3V061 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim80Q3V061 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim80Q3V061 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Trim80Q3V061 Gm43017-201ENSMUST00000198296 752 ntBASIC19.27■□□□□ 0.68
Trim80Q3V061 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim80Q3V061 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim80Q3V061 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Trim80Q3V061 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim80Q3V061 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim80Q3V061 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim80Q3V061 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Trim80Q3V061 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim80Q3V061 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim80Q3V061 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim80Q3V061 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim80Q3V061 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim80Q3V061 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim80Q3V061 Gm8493-201ENSMUST00000196881 489 ntBASIC19.26■□□□□ 0.67
Trim80Q3V061 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.26■□□□□ 0.67
Trim80Q3V061 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim80Q3V061 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Trim80Q3V061 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim80Q3V061 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim80Q3V061 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim80Q3V061 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim80Q3V061 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim80Q3V061 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim80Q3V061 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim80Q3V061 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim80Q3V061 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim80Q3V061 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim80Q3V061 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim80Q3V061 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim80Q3V061 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.25■□□□□ 0.67
Trim80Q3V061 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim80Q3V061 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim80Q3V061 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.25■□□□□ 0.67
Trim80Q3V061 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.25■□□□□ 0.67
Trim80Q3V061 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim80Q3V061 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim80Q3V061 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Trim80Q3V061 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim80Q3V061 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trim80Q3V061 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim80Q3V061 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim80Q3V061 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim80Q3V061 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim80Q3V061 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim80Q3V061 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim80Q3V061 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms