Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Gm20049-201ENSMUST00000219950 730 ntBASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29609Q3UU56 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.65■□□□□ 0.74
Gm29609Q3UU56 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29609Q3UU56 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm29609Q3UU56 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Gm29609Q3UU56 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.64■□□□□ 0.74
Gm29609Q3UU56 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Gm29609Q3UU56 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Gm29609Q3UU56 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29609Q3UU56 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29609Q3UU56 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Gm29609Q3UU56 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29609Q3UU56 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.62■□□□□ 0.73
Gm29609Q3UU56 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29609Q3UU56 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.62■□□□□ 0.73
Gm29609Q3UU56 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29609Q3UU56 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29609Q3UU56 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29609Q3UU56 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Gm37856-201ENSMUST00000191634 999 ntBASIC19.61■□□□□ 0.73
Gm29609Q3UU56 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29609Q3UU56 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29609Q3UU56 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gm29609Q3UU56 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29609Q3UU56 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.6■□□□□ 0.73
Gm29609Q3UU56 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gm29609Q3UU56 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29609Q3UU56 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29609Q3UU56 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29609Q3UU56 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29609Q3UU56 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29609Q3UU56 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm29609Q3UU56 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Gm29609Q3UU56 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.59■□□□□ 0.73
Gm29609Q3UU56 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm29609Q3UU56 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.59■□□□□ 0.73
Gm29609Q3UU56 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.59■□□□□ 0.73
Gm29609Q3UU56 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Gm29609Q3UU56 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms