Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nlrc4Q3UP24 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nlrc4Q3UP24 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nlrc4Q3UP24 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nlrc4Q3UP24 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nlrc4Q3UP24 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nlrc4Q3UP24 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nlrc4Q3UP24 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nlrc4Q3UP24 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nlrc4Q3UP24 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nlrc4Q3UP24 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nlrc4Q3UP24 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Gm6365-201ENSMUST00000054711 744 ntBASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nlrc4Q3UP24 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nlrc4Q3UP24 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 BC021767-201ENSMUST00000126387 1716 ntBASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nlrc4Q3UP24 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nlrc4Q3UP24 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms