Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc4Q3TCX3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Khdc4Q3TCX3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc4Q3TCX3 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.79■□□□□ 0.44
Khdc4Q3TCX3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Khdc4Q3TCX3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc4Q3TCX3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc4Q3TCX3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc4Q3TCX3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc4Q3TCX3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc4Q3TCX3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 Gm13146-201ENSMUST00000118508 780 ntBASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Khdc4Q3TCX3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Khdc4Q3TCX3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Khdc4Q3TCX3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Gm6365-201ENSMUST00000054711 744 ntBASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Khdc4Q3TCX3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Gm6420-201ENSMUST00000193885 723 ntBASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc4Q3TCX3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc4Q3TCX3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc4Q3TCX3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc4Q3TCX3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Khdc4Q3TCX3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.74■□□□□ 0.43
Khdc4Q3TCX3 Gm4968-201ENSMUST00000071458 858 ntBASIC17.74■□□□□ 0.43
Khdc4Q3TCX3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc4Q3TCX3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc4Q3TCX3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc4Q3TCX3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc4Q3TCX3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Gm10653-202ENSMUST00000139570 835 ntBASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Nespas-201ENSMUST00000143738 1083 ntBASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc4Q3TCX3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms