Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cul4aQ3TCH7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Gm8493-201ENSMUST00000196881 489 ntBASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cul4aQ3TCH7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cul4aQ3TCH7 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.69■□□□□ 0.74
Cul4aQ3TCH7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cul4aQ3TCH7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cul4aQ3TCH7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cul4aQ3TCH7 Rarb-207ENSMUST00000225921 2756 ntBASIC19.69■□□□□ 0.74
Cul4aQ3TCH7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cul4aQ3TCH7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cul4aQ3TCH7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cul4aQ3TCH7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cul4aQ3TCH7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cul4aQ3TCH7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms