Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col19a1Q0VF58 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Col19a1Q0VF58 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.18■□□□□ 0.82
Col19a1Q0VF58 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Col19a1Q0VF58 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Col19a1Q0VF58 AA414768-201ENSMUST00000121924 1257 ntBASIC20.18■□□□□ 0.82
Col19a1Q0VF58 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Col19a1Q0VF58 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.18■□□□□ 0.82
Col19a1Q0VF58 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Col19a1Q0VF58 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Col19a1Q0VF58 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col19a1Q0VF58 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col19a1Q0VF58 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.17■□□□□ 0.82
Col19a1Q0VF58 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col19a1Q0VF58 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col19a1Q0VF58 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.17■□□□□ 0.82
Col19a1Q0VF58 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.17■□□□□ 0.82
Col19a1Q0VF58 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col19a1Q0VF58 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.16■□□□□ 0.82
Col19a1Q0VF58 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col19a1Q0VF58 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col19a1Q0VF58 Gm42545-201ENSMUST00000202755 922 ntBASIC20.16■□□□□ 0.82
Col19a1Q0VF58 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.16■□□□□ 0.82
Col19a1Q0VF58 Odf3b-204ENSMUST00000227834 930 ntBASIC20.16■□□□□ 0.82
Col19a1Q0VF58 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.16■□□□□ 0.82
Col19a1Q0VF58 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.16■□□□□ 0.82
Col19a1Q0VF58 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col19a1Q0VF58 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Col19a1Q0VF58 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col19a1Q0VF58 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Col19a1Q0VF58 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Col19a1Q0VF58 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col19a1Q0VF58 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.14■□□□□ 0.81
Col19a1Q0VF58 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col19a1Q0VF58 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.14■□□□□ 0.81
Col19a1Q0VF58 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.14■□□□□ 0.81
Col19a1Q0VF58 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.14■□□□□ 0.81
Col19a1Q0VF58 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col19a1Q0VF58 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col19a1Q0VF58 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col19a1Q0VF58 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.13■□□□□ 0.81
Col19a1Q0VF58 Gm18025-201ENSMUST00000221733 862 ntBASIC20.13■□□□□ 0.81
Col19a1Q0VF58 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Col19a1Q0VF58 Timm23-208ENSMUST00000226683 750 ntBASIC20.13■□□□□ 0.81
Col19a1Q0VF58 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col19a1Q0VF58 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Col19a1Q0VF58 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col19a1Q0VF58 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Col19a1Q0VF58 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col19a1Q0VF58 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col19a1Q0VF58 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col19a1Q0VF58 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.12■□□□□ 0.81
Col19a1Q0VF58 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col19a1Q0VF58 Gm7461-201ENSMUST00000058918 827 ntBASIC20.12■□□□□ 0.81
Col19a1Q0VF58 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.12■□□□□ 0.81
Col19a1Q0VF58 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col19a1Q0VF58 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col19a1Q0VF58 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.11■□□□□ 0.81
Col19a1Q0VF58 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Gm18959-201ENSMUST00000208954 655 ntBASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Gm18032-201ENSMUST00000222541 538 ntBASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col19a1Q0VF58 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.1■□□□□ 0.81
Col19a1Q0VF58 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms