Protein–RNA interactions for Protein: Q02576

Nhlh1, Helix-loop-helix protein 1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlh1Q02576 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhlh1Q02576 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhlh1Q02576 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nhlh1Q02576 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.86■□□□□ 0.61
Nhlh1Q02576 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.86■□□□□ 0.61
Nhlh1Q02576 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Nhlh1Q02576 Timm23-208ENSMUST00000226683 750 ntBASIC18.86■□□□□ 0.61
Nhlh1Q02576 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nhlh1Q02576 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nhlh1Q02576 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Nhlh1Q02576 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nhlh1Q02576 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.85■□□□□ 0.61
Nhlh1Q02576 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlh1Q02576 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nhlh1Q02576 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nhlh1Q02576 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nhlh1Q02576 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nhlh1Q02576 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhlh1Q02576 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nhlh1Q02576 Gm14859-201ENSMUST00000117752 357 ntBASIC18.84■□□□□ 0.61
Nhlh1Q02576 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nhlh1Q02576 Gm18959-201ENSMUST00000208954 655 ntBASIC18.84■□□□□ 0.61
Nhlh1Q02576 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhlh1Q02576 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhlh1Q02576 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nhlh1Q02576 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.84■□□□□ 0.61
Nhlh1Q02576 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nhlh1Q02576 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nhlh1Q02576 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nhlh1Q02576 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nhlh1Q02576 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nhlh1Q02576 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nhlh1Q02576 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nhlh1Q02576 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Gm42545-201ENSMUST00000202755 922 ntBASIC18.82■□□□□ 0.6
Nhlh1Q02576 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Gm18025-201ENSMUST00000221733 862 ntBASIC18.82■□□□□ 0.6
Nhlh1Q02576 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.82■□□□□ 0.6
Nhlh1Q02576 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhlh1Q02576 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhlh1Q02576 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhlh1Q02576 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhlh1Q02576 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhlh1Q02576 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhlh1Q02576 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.81■□□□□ 0.6
Nhlh1Q02576 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhlh1Q02576 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.81■□□□□ 0.6
Nhlh1Q02576 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Nhlh1Q02576 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.8■□□□□ 0.6
Nhlh1Q02576 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nhlh1Q02576 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhlh1Q02576 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhlh1Q02576 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.8■□□□□ 0.6
Nhlh1Q02576 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.8■□□□□ 0.6
Nhlh1Q02576 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nhlh1Q02576 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhlh1Q02576 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.8■□□□□ 0.6
Nhlh1Q02576 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.8■□□□□ 0.6
Nhlh1Q02576 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhlh1Q02576 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Gm12382-201ENSMUST00000122005 922 ntBASIC18.79■□□□□ 0.6
Nhlh1Q02576 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Gm18032-201ENSMUST00000222541 538 ntBASIC18.79■□□□□ 0.6
Nhlh1Q02576 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nhlh1Q02576 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.79■□□□□ 0.6
Nhlh1Q02576 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhlh1Q02576 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms