Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smad4P97471 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smad4P97471 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smad4P97471 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smad4P97471 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.89■□□□□ 0.62
Smad4P97471 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
Smad4P97471 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smad4P97471 Gm10013-201ENSMUST00000106074 672 ntBASIC18.89■□□□□ 0.61
Smad4P97471 Gm10138-203ENSMUST00000206952 366 ntBASIC18.89■□□□□ 0.61
Smad4P97471 Gm18101-201ENSMUST00000215769 548 ntBASIC18.89■□□□□ 0.61
Smad4P97471 Gm18025-201ENSMUST00000221733 862 ntBASIC18.89■□□□□ 0.61
Smad4P97471 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smad4P97471 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smad4P97471 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smad4P97471 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smad4P97471 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smad4P97471 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smad4P97471 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad4P97471 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.88■□□□□ 0.61
Smad4P97471 AA414768-201ENSMUST00000121924 1257 ntBASIC18.88■□□□□ 0.61
Smad4P97471 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smad4P97471 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smad4P97471 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smad4P97471 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad4P97471 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad4P97471 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad4P97471 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad4P97471 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad4P97471 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad4P97471 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.88■□□□□ 0.61
Smad4P97471 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smad4P97471 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad4P97471 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.87■□□□□ 0.61
Smad4P97471 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smad4P97471 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Smad4P97471 Gm6345-202ENSMUST00000180900 204 ntBASIC18.87■□□□□ 0.61
Smad4P97471 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.87■□□□□ 0.61
Smad4P97471 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad4P97471 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad4P97471 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad4P97471 Mtag2-201ENSMUST00000058665 714 ntBASIC18.87■□□□□ 0.61
Smad4P97471 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Smad4P97471 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad4P97471 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smad4P97471 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.86■□□□□ 0.61
Smad4P97471 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad4P97471 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.86■□□□□ 0.61
Smad4P97471 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.85■□□□□ 0.61
Smad4P97471 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.85■□□□□ 0.61
Smad4P97471 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.85■□□□□ 0.61
Smad4P97471 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad4P97471 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad4P97471 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad4P97471 Gm18959-201ENSMUST00000208954 655 ntBASIC18.85■□□□□ 0.61
Smad4P97471 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad4P97471 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smad4P97471 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad4P97471 Gm9103-201ENSMUST00000119371 405 ntBASIC18.84■□□□□ 0.61
Smad4P97471 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad4P97471 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smad4P97471 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.84■□□□□ 0.61
Smad4P97471 Gm42545-201ENSMUST00000202755 922 ntBASIC18.84■□□□□ 0.61
Smad4P97471 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.84■□□□□ 0.61
Smad4P97471 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad4P97471 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad4P97471 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smad4P97471 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad4P97471 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smad4P97471 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Smad4P97471 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smad4P97471 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smad4P97471 Gm15375-201ENSMUST00000119510 849 ntBASIC18.83■□□□□ 0.6
Smad4P97471 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.83■□□□□ 0.6
Smad4P97471 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
Smad4P97471 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smad4P97471 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad4P97471 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad4P97471 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad4P97471 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.82■□□□□ 0.6
Smad4P97471 Gm12382-201ENSMUST00000122005 922 ntBASIC18.82■□□□□ 0.6
Smad4P97471 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.82■□□□□ 0.6
Smad4P97471 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smad4P97471 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad4P97471 Zfp783-201ENSMUST00000095946 670 ntBASIC18.82■□□□□ 0.6
Smad4P97471 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad4P97471 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad4P97471 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad4P97471 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad4P97471 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms