Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkdcP97313 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PrkdcP97313 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.03□□□□□ -0.32
PrkdcP97313 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PrkdcP97313 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.03□□□□□ -0.32
PrkdcP97313 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkdcP97313 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.02□□□□□ -0.32
PrkdcP97313 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
PrkdcP97313 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PrkdcP97313 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PrkdcP97313 Gm45058-201ENSMUST00000205810 766 ntBASIC13.02□□□□□ -0.32
PrkdcP97313 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PrkdcP97313 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PrkdcP97313 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PrkdcP97313 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
PrkdcP97313 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.02□□□□□ -0.33
PrkdcP97313 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PrkdcP97313 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PrkdcP97313 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PrkdcP97313 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PrkdcP97313 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PrkdcP97313 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PrkdcP97313 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.02□□□□□ -0.33
PrkdcP97313 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PrkdcP97313 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC13.02□□□□□ -0.33
PrkdcP97313 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 Gm17661-201ENSMUST00000170317 270 ntBASIC13.01□□□□□ -0.33
PrkdcP97313 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC13.01□□□□□ -0.33
PrkdcP97313 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.01□□□□□ -0.33
PrkdcP97313 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.01□□□□□ -0.33
PrkdcP97313 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PrkdcP97313 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC13.01□□□□□ -0.33
PrkdcP97313 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
PrkdcP97313 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13□□□□□ -0.33
PrkdcP97313 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PrkdcP97313 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13□□□□□ -0.33
PrkdcP97313 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PrkdcP97313 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
PrkdcP97313 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13□□□□□ -0.33
PrkdcP97313 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PrkdcP97313 Gm26971-201ENSMUST00000182423 1072 ntBASIC13□□□□□ -0.33
PrkdcP97313 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PrkdcP97313 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
PrkdcP97313 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PrkdcP97313 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
PrkdcP97313 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13□□□□□ -0.33
PrkdcP97313 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PrkdcP97313 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PrkdcP97313 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
PrkdcP97313 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
PrkdcP97313 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC12.99□□□□□ -0.33
PrkdcP97313 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PrkdcP97313 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.99□□□□□ -0.33
PrkdcP97313 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkdcP97313 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkdcP97313 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrkdcP97313 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkdcP97313 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrkdcP97313 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrkdcP97313 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkdcP97313 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkdcP97313 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
PrkdcP97313 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrkdcP97313 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkdcP97313 Gm26766-202ENSMUST00000227544 2347 ntBASIC12.98□□□□□ -0.33
PrkdcP97313 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PrkdcP97313 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PrkdcP97313 Gm11927-201ENSMUST00000118472 759 ntBASIC12.98□□□□□ -0.33
PrkdcP97313 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkdcP97313 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
PrkdcP97313 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.97□□□□□ -0.33
PrkdcP97313 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.97□□□□□ -0.33
PrkdcP97313 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC12.97□□□□□ -0.33
PrkdcP97313 Snhg20-203ENSMUST00000182811 2153 ntBASIC12.97□□□□□ -0.33
PrkdcP97313 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms