Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cks1bP61025 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cks1bP61025 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1bP61025 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1bP61025 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.35□□□□□ -0.27
Cks1bP61025 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1bP61025 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1bP61025 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1bP61025 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1bP61025 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1bP61025 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1bP61025 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cks1bP61025 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1bP61025 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cks1bP61025 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1bP61025 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1bP61025 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1bP61025 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1bP61025 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.34□□□□□ -0.27
Cks1bP61025 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.34□□□□□ -0.27
Cks1bP61025 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1bP61025 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cks1bP61025 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cks1bP61025 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cks1bP61025 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1bP61025 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1bP61025 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1bP61025 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cks1bP61025 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1bP61025 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Cks1bP61025 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cks1bP61025 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cks1bP61025 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cks1bP61025 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1bP61025 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1bP61025 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cks1bP61025 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1bP61025 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1bP61025 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.33□□□□□ -0.28
Cks1bP61025 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1bP61025 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1bP61025 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1bP61025 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1bP61025 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1bP61025 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1bP61025 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cks1bP61025 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1bP61025 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1bP61025 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1bP61025 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1bP61025 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cks1bP61025 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1bP61025 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.32□□□□□ -0.28
Cks1bP61025 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cks1bP61025 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1bP61025 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1bP61025 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1bP61025 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1bP61025 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cks1bP61025 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cks1bP61025 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.31□□□□□ -0.28
Cks1bP61025 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cks1bP61025 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cks1bP61025 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cks1bP61025 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1bP61025 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Cks1bP61025 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cks1bP61025 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cks1bP61025 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.3□□□□□ -0.28
Cks1bP61025 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.3□□□□□ -0.28
Cks1bP61025 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.3□□□□□ -0.28
Cks1bP61025 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cks1bP61025 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.3□□□□□ -0.28
Cks1bP61025 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.3□□□□□ -0.28
Cks1bP61025 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1bP61025 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1bP61025 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1bP61025 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1bP61025 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms