Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Slc1a3P56564 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc1a3P56564 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc1a3P56564 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Slc1a3P56564 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc1a3P56564 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc1a3P56564 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.8■□□□□ 0.28
Slc1a3P56564 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.8■□□□□ 0.28
Slc1a3P56564 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.8■□□□□ 0.28
Slc1a3P56564 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc1a3P56564 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc1a3P56564 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc1a3P56564 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.8■□□□□ 0.28
Slc1a3P56564 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Slc1a3P56564 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Slc1a3P56564 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc1a3P56564 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc1a3P56564 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.79■□□□□ 0.28
Slc1a3P56564 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Slc1a3P56564 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Slc1a3P56564 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Slc1a3P56564 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Slc1a3P56564 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Slc1a3P56564 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc1a3P56564 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Slc1a3P56564 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Slc1a3P56564 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Slc1a3P56564 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.78■□□□□ 0.28
Slc1a3P56564 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.78■□□□□ 0.28
Slc1a3P56564 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc1a3P56564 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Slc1a3P56564 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc1a3P56564 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc1a3P56564 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.77■□□□□ 0.28
Slc1a3P56564 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.77■□□□□ 0.28
Slc1a3P56564 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Slc1a3P56564 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc1a3P56564 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc1a3P56564 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Slc1a3P56564 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slc1a3P56564 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc1a3P56564 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc1a3P56564 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Slc1a3P56564 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a3P56564 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a3P56564 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Slc1a3P56564 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Slc1a3P56564 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.76■□□□□ 0.27
Slc1a3P56564 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.76■□□□□ 0.27
Slc1a3P56564 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a3P56564 Gm9959-201ENSMUST00000068277 390 ntBASIC16.76■□□□□ 0.27
Slc1a3P56564 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a3P56564 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a3P56564 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a3P56564 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a3P56564 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc1a3P56564 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.75■□□□□ 0.27
Slc1a3P56564 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a3P56564 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.75■□□□□ 0.27
Slc1a3P56564 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a3P56564 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.75■□□□□ 0.27
Slc1a3P56564 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a3P56564 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a3P56564 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a3P56564 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Slc1a3P56564 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc1a3P56564 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a3P56564 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Slc1a3P56564 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a3P56564 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a3P56564 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.74■□□□□ 0.27
Slc1a3P56564 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a3P56564 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a3P56564 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.74■□□□□ 0.27
Slc1a3P56564 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms