Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkn2bP55271 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cdkn2bP55271 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.97■□□□□ 0.47
Cdkn2bP55271 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkn2bP55271 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkn2bP55271 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkn2bP55271 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkn2bP55271 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkn2bP55271 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkn2bP55271 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkn2bP55271 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cdkn2bP55271 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkn2bP55271 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.96■□□□□ 0.47
Cdkn2bP55271 Smad6-203ENSMUST00000179458 273 ntBASIC17.96■□□□□ 0.47
Cdkn2bP55271 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cdkn2bP55271 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdkn2bP55271 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdkn2bP55271 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdkn2bP55271 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdkn2bP55271 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
Cdkn2bP55271 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.95■□□□□ 0.46
Cdkn2bP55271 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn2bP55271 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Gm11421-201ENSMUST00000122124 294 ntBASIC17.94■□□□□ 0.46
Cdkn2bP55271 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn2bP55271 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.94■□□□□ 0.46
Cdkn2bP55271 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.93■□□□□ 0.46
Cdkn2bP55271 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn2bP55271 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Cdkn2bP55271 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdkn2bP55271 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdkn2bP55271 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdkn2bP55271 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdkn2bP55271 Gm27801-201ENSMUST00000184174 223 ntBASIC17.92■□□□□ 0.46
Cdkn2bP55271 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdkn2bP55271 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn2bP55271 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn2bP55271 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn2bP55271 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn2bP55271 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn2bP55271 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn2bP55271 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn2bP55271 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn2bP55271 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn2bP55271 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms