Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atxn1P54254 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atxn1P54254 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atxn1P54254 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atxn1P54254 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Atxn1P54254 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.59■□□□□ 0.57
Atxn1P54254 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.59■□□□□ 0.57
Atxn1P54254 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.59■□□□□ 0.57
Atxn1P54254 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Atxn1P54254 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atxn1P54254 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atxn1P54254 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atxn1P54254 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atxn1P54254 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Atxn1P54254 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.58■□□□□ 0.56
Atxn1P54254 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atxn1P54254 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atxn1P54254 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Atxn1P54254 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.58■□□□□ 0.56
Atxn1P54254 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atxn1P54254 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atxn1P54254 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atxn1P54254 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atxn1P54254 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atxn1P54254 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atxn1P54254 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atxn1P54254 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atxn1P54254 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Atxn1P54254 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Atxn1P54254 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Atxn1P54254 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Atxn1P54254 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 Gm10819-201ENSMUST00000099988 561 ntBASIC18.57■□□□□ 0.56
Atxn1P54254 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atxn1P54254 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Atxn1P54254 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atxn1P54254 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atxn1P54254 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.56■□□□□ 0.56
Atxn1P54254 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.56■□□□□ 0.56
Atxn1P54254 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Atxn1P54254 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Atxn1P54254 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.56■□□□□ 0.56
Atxn1P54254 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.56■□□□□ 0.56
Atxn1P54254 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atxn1P54254 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Atxn1P54254 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atxn1P54254 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atxn1P54254 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atxn1P54254 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atxn1P54254 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atxn1P54254 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atxn1P54254 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
Atxn1P54254 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atxn1P54254 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atxn1P54254 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atxn1P54254 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.55■□□□□ 0.56
Atxn1P54254 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Atxn1P54254 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.55■□□□□ 0.56
Atxn1P54254 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.55■□□□□ 0.56
Atxn1P54254 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atxn1P54254 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.55■□□□□ 0.56
Atxn1P54254 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atxn1P54254 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.54■□□□□ 0.56
Atxn1P54254 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Atxn1P54254 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Atxn1P54254 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Atxn1P54254 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn1P54254 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn1P54254 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.53■□□□□ 0.56
Atxn1P54254 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn1P54254 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn1P54254 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn1P54254 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Atxn1P54254 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Atxn1P54254 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Atxn1P54254 Gm2559-201ENSMUST00000201323 363 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms