Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fdft1P53798 Grk6-206ENSMUST00000224995 2971 ntBASIC18.67■□□□□ 0.58
Fdft1P53798 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fdft1P53798 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.67■□□□□ 0.58
Fdft1P53798 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fdft1P53798 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fdft1P53798 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fdft1P53798 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.66■□□□□ 0.58
Fdft1P53798 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Fdft1P53798 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fdft1P53798 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Fdft1P53798 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Fdft1P53798 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Fdft1P53798 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Fdft1P53798 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fdft1P53798 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fdft1P53798 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fdft1P53798 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Fdft1P53798 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.65■□□□□ 0.58
Fdft1P53798 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fdft1P53798 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fdft1P53798 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fdft1P53798 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fdft1P53798 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Fdft1P53798 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.64■□□□□ 0.58
Fdft1P53798 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Fdft1P53798 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Fdft1P53798 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fdft1P53798 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Fdft1P53798 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.64■□□□□ 0.57
Fdft1P53798 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.64■□□□□ 0.57
Fdft1P53798 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Fdft1P53798 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.64■□□□□ 0.57
Fdft1P53798 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.64■□□□□ 0.57
Fdft1P53798 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fdft1P53798 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fdft1P53798 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fdft1P53798 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fdft1P53798 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Fdft1P53798 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fdft1P53798 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.63■□□□□ 0.57
Fdft1P53798 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.63■□□□□ 0.57
Fdft1P53798 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.63■□□□□ 0.57
Fdft1P53798 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.63■□□□□ 0.57
Fdft1P53798 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Fdft1P53798 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.63■□□□□ 0.57
Fdft1P53798 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Fdft1P53798 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Fdft1P53798 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.62■□□□□ 0.57
Fdft1P53798 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Gm7860-201ENSMUST00000121190 879 ntBASIC18.62■□□□□ 0.57
Fdft1P53798 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.62■□□□□ 0.57
Fdft1P53798 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.62■□□□□ 0.57
Fdft1P53798 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.62■□□□□ 0.57
Fdft1P53798 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Fdft1P53798 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Fdft1P53798 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.62■□□□□ 0.57
Fdft1P53798 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.62■□□□□ 0.57
Fdft1P53798 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.62■□□□□ 0.57
Fdft1P53798 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fdft1P53798 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fdft1P53798 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fdft1P53798 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms