Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Xcl1P47993 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Xcl1P47993 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Xcl1P47993 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Xcl1P47993 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Xcl1P47993 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.31□□□□□ -0.44
Xcl1P47993 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Xcl1P47993 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Xcl1P47993 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Xcl1P47993 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Xcl1P47993 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Xcl1P47993 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Xcl1P47993 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Xcl1P47993 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Xcl1P47993 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Xcl1P47993 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC12.3□□□□□ -0.44
Xcl1P47993 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC12.3□□□□□ -0.44
Xcl1P47993 Zfp131-205ENSMUST00000223812 663 ntBASIC12.3□□□□□ -0.44
Xcl1P47993 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC12.3□□□□□ -0.44
Xcl1P47993 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Xcl1P47993 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Xcl1P47993 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Xcl1P47993 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Xcl1P47993 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Xcl1P47993 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Xcl1P47993 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.3□□□□□ -0.44
Xcl1P47993 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.29□□□□□ -0.44
Xcl1P47993 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.29□□□□□ -0.44
Xcl1P47993 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Xcl1P47993 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Xcl1P47993 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC12.29□□□□□ -0.44
Xcl1P47993 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Xcl1P47993 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.29□□□□□ -0.44
Xcl1P47993 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Xcl1P47993 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Xcl1P47993 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Xcl1P47993 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Xcl1P47993 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Xcl1P47993 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Xcl1P47993 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Xcl1P47993 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.28□□□□□ -0.44
Xcl1P47993 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Xcl1P47993 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC12.28□□□□□ -0.44
Xcl1P47993 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC12.28□□□□□ -0.44
Xcl1P47993 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Xcl1P47993 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.28□□□□□ -0.44
Xcl1P47993 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Xcl1P47993 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Xcl1P47993 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.28□□□□□ -0.44
Xcl1P47993 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.27□□□□□ -0.44
Xcl1P47993 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Xcl1P47993 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Xcl1P47993 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Xcl1P47993 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Xcl1P47993 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.27□□□□□ -0.44
Xcl1P47993 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Xcl1P47993 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Xcl1P47993 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Xcl1P47993 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC12.27□□□□□ -0.45
Xcl1P47993 Gm9397-201ENSMUST00000200125 605 ntBASIC12.27□□□□□ -0.45
Xcl1P47993 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms