Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sox18P43680 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Sox18P43680 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.96■□□□□ 0.47
Sox18P43680 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.96■□□□□ 0.47
Sox18P43680 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.96■□□□□ 0.47
Sox18P43680 Gm37444-201ENSMUST00000193605 439 ntBASIC17.96■□□□□ 0.47
Sox18P43680 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.96■□□□□ 0.47
Sox18P43680 Gm44549-201ENSMUST00000208351 577 ntBASIC17.96■□□□□ 0.47
Sox18P43680 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.96■□□□□ 0.47
Sox18P43680 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Sox18P43680 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox18P43680 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox18P43680 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox18P43680 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sox18P43680 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sox18P43680 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Sox18P43680 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sox18P43680 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Sox18P43680 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox18P43680 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox18P43680 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox18P43680 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox18P43680 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sox18P43680 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Sox18P43680 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox18P43680 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.94■□□□□ 0.46
Sox18P43680 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.94■□□□□ 0.46
Sox18P43680 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox18P43680 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox18P43680 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox18P43680 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox18P43680 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Sox18P43680 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox18P43680 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sox18P43680 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Sox18P43680 Gm2399-201ENSMUST00000104944 225 ntBASIC17.93■□□□□ 0.46
Sox18P43680 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.93■□□□□ 0.46
Sox18P43680 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Sox18P43680 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sox18P43680 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.93■□□□□ 0.46
Sox18P43680 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.93■□□□□ 0.46
Sox18P43680 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.93■□□□□ 0.46
Sox18P43680 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox18P43680 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox18P43680 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Sox18P43680 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sox18P43680 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.92■□□□□ 0.46
Sox18P43680 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox18P43680 Gm7367-201ENSMUST00000057611 492 ntBASIC17.92■□□□□ 0.46
Sox18P43680 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Sox18P43680 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox18P43680 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox18P43680 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Sox18P43680 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sox18P43680 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sox18P43680 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.91■□□□□ 0.46
Sox18P43680 Gm27741-201ENSMUST00000185060 237 ntBASIC17.91■□□□□ 0.46
Sox18P43680 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox18P43680 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox18P43680 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox18P43680 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.91■□□□□ 0.46
Sox18P43680 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.91■□□□□ 0.46
Sox18P43680 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox18P43680 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms