Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pbx1P41778 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pbx1P41778 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Pbx1P41778 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pbx1P41778 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.29■□□□□ 0.84
Pbx1P41778 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pbx1P41778 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pbx1P41778 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pbx1P41778 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pbx1P41778 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.29■□□□□ 0.84
Pbx1P41778 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pbx1P41778 Mir7075-201ENSMUST00000184187 82 ntBASIC20.29■□□□□ 0.84
Pbx1P41778 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pbx1P41778 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pbx1P41778 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pbx1P41778 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pbx1P41778 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.29■□□□□ 0.84
Pbx1P41778 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pbx1P41778 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pbx1P41778 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pbx1P41778 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pbx1P41778 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.28■□□□□ 0.84
Pbx1P41778 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.28■□□□□ 0.84
Pbx1P41778 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pbx1P41778 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pbx1P41778 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pbx1P41778 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pbx1P41778 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pbx1P41778 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pbx1P41778 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.27■□□□□ 0.84
Pbx1P41778 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pbx1P41778 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pbx1P41778 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pbx1P41778 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pbx1P41778 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Pbx1P41778 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pbx1P41778 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pbx1P41778 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pbx1P41778 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pbx1P41778 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Pbx1P41778 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pbx1P41778 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pbx1P41778 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pbx1P41778 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pbx1P41778 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pbx1P41778 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pbx1P41778 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pbx1P41778 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.24■□□□□ 0.83
Pbx1P41778 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pbx1P41778 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pbx1P41778 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pbx1P41778 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pbx1P41778 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pbx1P41778 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.24■□□□□ 0.83
Pbx1P41778 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.24■□□□□ 0.83
Pbx1P41778 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pbx1P41778 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pbx1P41778 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pbx1P41778 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.24■□□□□ 0.83
Pbx1P41778 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pbx1P41778 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Pbx1P41778 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pbx1P41778 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pbx1P41778 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pbx1P41778 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Pbx1P41778 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Pbx1P41778 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pbx1P41778 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pbx1P41778 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pbx1P41778 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.23■□□□□ 0.83
Pbx1P41778 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pbx1P41778 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pbx1P41778 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pbx1P41778 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pbx1P41778 Gm13241-201ENSMUST00000094493 780 ntBASIC20.22■□□□□ 0.83
Pbx1P41778 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pbx1P41778 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pbx1P41778 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.22■□□□□ 0.83
Pbx1P41778 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pbx1P41778 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.21■□□□□ 0.83
Pbx1P41778 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pbx1P41778 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pbx1P41778 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pbx1P41778 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Pbx1P41778 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pbx1P41778 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pbx1P41778 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pbx1P41778 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Pbx1P41778 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.2■□□□□ 0.82
Pbx1P41778 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms