Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.94■□□□□ 0.46
Tnfsf9P41274 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfsf9P41274 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfsf9P41274 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.94■□□□□ 0.46
Tnfsf9P41274 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfsf9P41274 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfsf9P41274 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfsf9P41274 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.94■□□□□ 0.46
Tnfsf9P41274 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfsf9P41274 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfsf9P41274 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfsf9P41274 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfsf9P41274 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfsf9P41274 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfsf9P41274 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfsf9P41274 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfsf9P41274 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfsf9P41274 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfsf9P41274 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfsf9P41274 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Tnfsf9P41274 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Tnfsf9P41274 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfsf9P41274 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tnfsf9P41274 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.91■□□□□ 0.46
Tnfsf9P41274 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Tnfsf9P41274 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.91■□□□□ 0.46
Tnfsf9P41274 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf9P41274 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.9■□□□□ 0.46
Tnfsf9P41274 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.9■□□□□ 0.46
Tnfsf9P41274 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf9P41274 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tnfsf9P41274 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tnfsf9P41274 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.89■□□□□ 0.45
Tnfsf9P41274 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Tnfsf9P41274 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Iqck-206ENSMUST00000208658 2891 ntBASIC17.89■□□□□ 0.45
Tnfsf9P41274 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf9P41274 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Tnfsf9P41274 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf9P41274 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.88■□□□□ 0.45
Tnfsf9P41274 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Tnfsf9P41274 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms