Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Foxa1P35582 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxa1P35582 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.33■□□□□ 0.36
Foxa1P35582 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.33■□□□□ 0.36
Foxa1P35582 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxa1P35582 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.32■□□□□ 0.36
Foxa1P35582 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxa1P35582 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Foxa1P35582 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxa1P35582 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxa1P35582 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Foxa1P35582 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxa1P35582 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Foxa1P35582 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Foxa1P35582 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Foxa1P35582 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxa1P35582 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxa1P35582 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Foxa1P35582 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.31■□□□□ 0.36
Foxa1P35582 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Foxa1P35582 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Foxa1P35582 Gm6420-201ENSMUST00000193885 723 ntBASIC17.31■□□□□ 0.36
Foxa1P35582 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
Foxa1P35582 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxa1P35582 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.31■□□□□ 0.36
Foxa1P35582 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.3■□□□□ 0.36
Foxa1P35582 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.3■□□□□ 0.36
Foxa1P35582 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.3■□□□□ 0.36
Foxa1P35582 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Foxa1P35582 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Foxa1P35582 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Foxa1P35582 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxa1P35582 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Foxa1P35582 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.29■□□□□ 0.36
Foxa1P35582 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Foxa1P35582 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Nespas-201ENSMUST00000143738 1083 ntBASIC17.29■□□□□ 0.36
Foxa1P35582 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.29■□□□□ 0.36
Foxa1P35582 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 BC021767-201ENSMUST00000126387 1716 ntBASIC17.29■□□□□ 0.36
Foxa1P35582 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxa1P35582 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Golph3-205ENSMUST00000228671 2842 ntBASIC17.28■□□□□ 0.36
Foxa1P35582 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.28■□□□□ 0.36
Foxa1P35582 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.28■□□□□ 0.36
Foxa1P35582 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.28■□□□□ 0.36
Foxa1P35582 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Foxa1P35582 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Foxa1P35582 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.28■□□□□ 0.36
Foxa1P35582 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxa1P35582 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms