Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thbs1P35441 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thbs1P35441 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Thbs1P35441 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Thbs1P35441 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thbs1P35441 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thbs1P35441 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Thbs1P35441 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.31■□□□□ 0.36
Thbs1P35441 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.31■□□□□ 0.36
Thbs1P35441 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.31■□□□□ 0.36
Thbs1P35441 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Thbs1P35441 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.31■□□□□ 0.36
Thbs1P35441 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Thbs1P35441 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thbs1P35441 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Thbs1P35441 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.3■□□□□ 0.36
Thbs1P35441 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.3■□□□□ 0.36
Thbs1P35441 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Thbs1P35441 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Thbs1P35441 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.3■□□□□ 0.36
Thbs1P35441 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Thbs1P35441 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.29■□□□□ 0.36
Thbs1P35441 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.29■□□□□ 0.36
Thbs1P35441 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thbs1P35441 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thbs1P35441 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thbs1P35441 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Thbs1P35441 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.28■□□□□ 0.36
Thbs1P35441 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Thbs1P35441 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.28■□□□□ 0.36
Thbs1P35441 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Thbs1P35441 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.28■□□□□ 0.36
Thbs1P35441 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Thbs1P35441 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Thbs1P35441 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thbs1P35441 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thbs1P35441 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thbs1P35441 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thbs1P35441 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.27■□□□□ 0.36
Thbs1P35441 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Thbs1P35441 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Thbs1P35441 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Thbs1P35441 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Thbs1P35441 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Thbs1P35441 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.27■□□□□ 0.36
Thbs1P35441 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Thbs1P35441 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Thbs1P35441 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Thbs1P35441 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.27■□□□□ 0.35
Thbs1P35441 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Thbs1P35441 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Thbs1P35441 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thbs1P35441 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.26■□□□□ 0.35
Thbs1P35441 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Thbs1P35441 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thbs1P35441 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Thbs1P35441 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.26■□□□□ 0.35
Thbs1P35441 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.26■□□□□ 0.35
Thbs1P35441 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thbs1P35441 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Thbs1P35441 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Thbs1P35441 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thbs1P35441 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.25■□□□□ 0.35
Thbs1P35441 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Thbs1P35441 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thbs1P35441 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thbs1P35441 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms