Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rab5cP35278 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab5cP35278 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab5cP35278 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rab5cP35278 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab5cP35278 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab5cP35278 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab5cP35278 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab5cP35278 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rab5cP35278 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.33■□□□□ 0.04
Rab5cP35278 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab5cP35278 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rab5cP35278 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.32■□□□□ 0.04
Rab5cP35278 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab5cP35278 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab5cP35278 AA386476-201ENSMUST00000098781 1665 ntBASIC15.32■□□□□ 0.04
Rab5cP35278 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Rab5cP35278 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab5cP35278 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab5cP35278 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.32■□□□□ 0.04
Rab5cP35278 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab5cP35278 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.32■□□□□ 0.04
Rab5cP35278 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab5cP35278 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab5cP35278 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rab5cP35278 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab5cP35278 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab5cP35278 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab5cP35278 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab5cP35278 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab5cP35278 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab5cP35278 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab5cP35278 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab5cP35278 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rab5cP35278 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab5cP35278 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.31■□□□□ 0.04
Rab5cP35278 Gm7143-201ENSMUST00000222811 859 ntBASIC15.31■□□□□ 0.04
Rab5cP35278 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab5cP35278 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab5cP35278 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rab5cP35278 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab5cP35278 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rab5cP35278 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rab5cP35278 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rab5cP35278 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab5cP35278 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab5cP35278 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab5cP35278 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.3■□□□□ 0.04
Rab5cP35278 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rab5cP35278 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rab5cP35278 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.29■□□□□ 0.04
Rab5cP35278 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.29■□□□□ 0.04
Rab5cP35278 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.29■□□□□ 0.04
Rab5cP35278 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rab5cP35278 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rab5cP35278 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rab5cP35278 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab5cP35278 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.28■□□□□ 0.04
Rab5cP35278 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rab5cP35278 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rab5cP35278 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
Rab5cP35278 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab5cP35278 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rab5cP35278 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab5cP35278 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab5cP35278 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab5cP35278 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab5cP35278 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab5cP35278 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.27■□□□□ 0.04
Rab5cP35278 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
Rab5cP35278 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rab5cP35278 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.27■□□□□ 0.04
Rab5cP35278 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab5cP35278 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab5cP35278 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab5cP35278 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms