Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.84■□□□□ 0.61
RxrbP28704 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RxrbP28704 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RxrbP28704 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RxrbP28704 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RxrbP28704 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RxrbP28704 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RxrbP28704 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RxrbP28704 Golgb1-201ENSMUST00000023534 498 ntBASIC18.84■□□□□ 0.61
RxrbP28704 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RxrbP28704 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RxrbP28704 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RxrbP28704 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.84■□□□□ 0.61
RxrbP28704 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RxrbP28704 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RxrbP28704 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RxrbP28704 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RxrbP28704 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RxrbP28704 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RxrbP28704 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RxrbP28704 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RxrbP28704 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RxrbP28704 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RxrbP28704 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.82■□□□□ 0.6
RxrbP28704 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.82■□□□□ 0.6
RxrbP28704 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.82■□□□□ 0.6
RxrbP28704 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RxrbP28704 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RxrbP28704 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.81■□□□□ 0.6
RxrbP28704 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.81■□□□□ 0.6
RxrbP28704 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RxrbP28704 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RxrbP28704 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RxrbP28704 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RxrbP28704 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RxrbP28704 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RxrbP28704 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.81■□□□□ 0.6
RxrbP28704 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RxrbP28704 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RxrbP28704 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RxrbP28704 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RxrbP28704 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RxrbP28704 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RxrbP28704 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RxrbP28704 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.8■□□□□ 0.6
RxrbP28704 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.8■□□□□ 0.6
RxrbP28704 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RxrbP28704 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RxrbP28704 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RxrbP28704 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.8■□□□□ 0.6
RxrbP28704 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RxrbP28704 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RxrbP28704 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RxrbP28704 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RxrbP28704 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RxrbP28704 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RxrbP28704 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RxrbP28704 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RxrbP28704 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RxrbP28704 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
RxrbP28704 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.79■□□□□ 0.6
RxrbP28704 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RxrbP28704 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.79■□□□□ 0.6
RxrbP28704 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RxrbP28704 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RxrbP28704 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RxrbP28704 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RxrbP28704 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RxrbP28704 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RxrbP28704 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RxrbP28704 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.78■□□□□ 0.6
RxrbP28704 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.78■□□□□ 0.6
RxrbP28704 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.78■□□□□ 0.6
RxrbP28704 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RxrbP28704 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RxrbP28704 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RxrbP28704 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RxrbP28704 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.77■□□□□ 0.6
RxrbP28704 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RxrbP28704 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RxrbP28704 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RxrbP28704 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RxrbP28704 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RxrbP28704 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RxrbP28704 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RxrbP28704 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RxrbP28704 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.76■□□□□ 0.59
RxrbP28704 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.76■□□□□ 0.59
RxrbP28704 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms