Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gja8P28236 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gja8P28236 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gja8P28236 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gja8P28236 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gja8P28236 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.89■□□□□ 0.94
Gja8P28236 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Gja8P28236 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Gja8P28236 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gja8P28236 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Gja8P28236 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Gja8P28236 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gja8P28236 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gja8P28236 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gja8P28236 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.88■□□□□ 0.93
Gja8P28236 Gm13158-201ENSMUST00000122007 736 ntBASIC20.88■□□□□ 0.93
Gja8P28236 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.88■□□□□ 0.93
Gja8P28236 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gja8P28236 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gja8P28236 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gja8P28236 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gja8P28236 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gja8P28236 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.87■□□□□ 0.93
Gja8P28236 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.87■□□□□ 0.93
Gja8P28236 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gja8P28236 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gja8P28236 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.87■□□□□ 0.93
Gja8P28236 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gja8P28236 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gja8P28236 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Gja8P28236 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.86■□□□□ 0.93
Gja8P28236 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Gja8P28236 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gja8P28236 Gm5417-201ENSMUST00000079706 384 ntBASIC20.86■□□□□ 0.93
Gja8P28236 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gja8P28236 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gja8P28236 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gja8P28236 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Gja8P28236 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gja8P28236 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gja8P28236 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gja8P28236 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gja8P28236 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gja8P28236 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gja8P28236 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Gja8P28236 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gja8P28236 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gja8P28236 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.85■□□□□ 0.93
Gja8P28236 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gja8P28236 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gja8P28236 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Gja8P28236 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gja8P28236 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gja8P28236 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Gja8P28236 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Gja8P28236 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gja8P28236 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gja8P28236 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gja8P28236 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.84■□□□□ 0.93
Gja8P28236 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gja8P28236 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gja8P28236 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.83■□□□□ 0.93
Gja8P28236 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gja8P28236 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Gja8P28236 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gja8P28236 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gja8P28236 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Gja8P28236 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gja8P28236 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gja8P28236 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Gja8P28236 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gja8P28236 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Gja8P28236 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gja8P28236 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gja8P28236 Gm7367-201ENSMUST00000057611 492 ntBASIC20.82■□□□□ 0.92
Gja8P28236 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gja8P28236 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Gja8P28236 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gja8P28236 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gja8P28236 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gja8P28236 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gja8P28236 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Gja8P28236 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.81■□□□□ 0.92
Gja8P28236 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.81■□□□□ 0.92
Gja8P28236 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gja8P28236 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gja8P28236 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.81■□□□□ 0.92
Gja8P28236 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms