Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.65■□□□□ 0.74
H2afxP27661 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.65■□□□□ 0.74
H2afxP27661 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
H2afxP27661 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afxP27661 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.65■□□□□ 0.74
H2afxP27661 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afxP27661 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afxP27661 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afxP27661 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afxP27661 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afxP27661 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afxP27661 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
H2afxP27661 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
H2afxP27661 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.64■□□□□ 0.73
H2afxP27661 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afxP27661 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
H2afxP27661 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
H2afxP27661 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
H2afxP27661 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afxP27661 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afxP27661 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afxP27661 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.63■□□□□ 0.73
H2afxP27661 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
H2afxP27661 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afxP27661 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
H2afxP27661 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afxP27661 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.63■□□□□ 0.73
H2afxP27661 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afxP27661 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
H2afxP27661 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afxP27661 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afxP27661 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afxP27661 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afxP27661 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afxP27661 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afxP27661 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.62■□□□□ 0.73
H2afxP27661 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
H2afxP27661 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
H2afxP27661 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afxP27661 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
H2afxP27661 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afxP27661 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
H2afxP27661 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Gm10420-201ENSMUST00000121713 882 ntBASIC19.61■□□□□ 0.73
H2afxP27661 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.61■□□□□ 0.73
H2afxP27661 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.61■□□□□ 0.73
H2afxP27661 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afxP27661 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
H2afxP27661 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afxP27661 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afxP27661 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H2afxP27661 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afxP27661 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afxP27661 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
H2afxP27661 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
H2afxP27661 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afxP27661 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H2afxP27661 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.6■□□□□ 0.73
H2afxP27661 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afxP27661 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.6■□□□□ 0.73
H2afxP27661 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afxP27661 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afxP27661 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.59■□□□□ 0.73
H2afxP27661 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afxP27661 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
H2afxP27661 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.59■□□□□ 0.73
H2afxP27661 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
H2afxP27661 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.59■□□□□ 0.73
H2afxP27661 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afxP27661 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afxP27661 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.59■□□□□ 0.73
H2afxP27661 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afxP27661 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afxP27661 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afxP27661 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afxP27661 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afxP27661 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H2afxP27661 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
H2afxP27661 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H2afxP27661 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
H2afxP27661 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H2afxP27661 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
H2afxP27661 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
H2afxP27661 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
H2afxP27661 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
H2afxP27661 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afxP27661 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms