Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6bP23440 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6bP23440 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6bP23440 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.37■□□□□ 0.85
Pde6bP23440 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.37■□□□□ 0.85
Pde6bP23440 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6bP23440 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6bP23440 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pde6bP23440 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6bP23440 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6bP23440 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6bP23440 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6bP23440 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6bP23440 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.36■□□□□ 0.85
Pde6bP23440 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.36■□□□□ 0.85
Pde6bP23440 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6bP23440 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6bP23440 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6bP23440 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pde6bP23440 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6bP23440 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6bP23440 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6bP23440 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pde6bP23440 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.35■□□□□ 0.85
Pde6bP23440 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6bP23440 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6bP23440 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.35■□□□□ 0.85
Pde6bP23440 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.35■□□□□ 0.85
Pde6bP23440 Gm10252-201ENSMUST00000209541 832 ntBASIC20.35■□□□□ 0.85
Pde6bP23440 Gm10812-201ENSMUST00000099864 546 ntBASIC20.35■□□□□ 0.85
Pde6bP23440 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6bP23440 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6bP23440 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6bP23440 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6bP23440 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6bP23440 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6bP23440 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.34■□□□□ 0.85
Pde6bP23440 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.34■□□□□ 0.85
Pde6bP23440 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.34■□□□□ 0.85
Pde6bP23440 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6bP23440 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6bP23440 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Pde6bP23440 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6bP23440 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6bP23440 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6bP23440 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pde6bP23440 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.33■□□□□ 0.85
Pde6bP23440 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pde6bP23440 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pde6bP23440 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.33■□□□□ 0.85
Pde6bP23440 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pde6bP23440 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pde6bP23440 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pde6bP23440 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pde6bP23440 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pde6bP23440 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pde6bP23440 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pde6bP23440 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pde6bP23440 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pde6bP23440 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.32■□□□□ 0.84
Pde6bP23440 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pde6bP23440 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.32■□□□□ 0.84
Pde6bP23440 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pde6bP23440 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.32■□□□□ 0.84
Pde6bP23440 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pde6bP23440 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6bP23440 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6bP23440 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6bP23440 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.31■□□□□ 0.84
Pde6bP23440 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pde6bP23440 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
Pde6bP23440 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6bP23440 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6bP23440 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6bP23440 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.3■□□□□ 0.84
Pde6bP23440 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6bP23440 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6bP23440 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pde6bP23440 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.29■□□□□ 0.84
Pde6bP23440 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
Pde6bP23440 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6bP23440 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6bP23440 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6bP23440 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6bP23440 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6bP23440 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pde6bP23440 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms