Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmga1P17095 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hmga1P17095 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.27■□□□□ 0.68
Hmga1P17095 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmga1P17095 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmga1P17095 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.27■□□□□ 0.68
Hmga1P17095 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmga1P17095 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmga1P17095 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Hmga1P17095 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmga1P17095 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Hmga1P17095 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hmga1P17095 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hmga1P17095 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmga1P17095 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmga1P17095 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmga1P17095 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmga1P17095 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hmga1P17095 Trmt13-210ENSMUST00000198454 880 ntBASIC19.26■□□□□ 0.67
Hmga1P17095 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmga1P17095 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmga1P17095 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmga1P17095 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmga1P17095 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmga1P17095 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmga1P17095 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.25■□□□□ 0.67
Hmga1P17095 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmga1P17095 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmga1P17095 Gm12896-201ENSMUST00000118430 226 ntBASIC19.25■□□□□ 0.67
Hmga1P17095 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmga1P17095 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmga1P17095 Gm22240-201ENSMUST00000175225 82 ntBASIC19.25■□□□□ 0.67
Hmga1P17095 Gm8520-201ENSMUST00000186517 868 ntBASIC19.25■□□□□ 0.67
Hmga1P17095 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.25■□□□□ 0.67
Hmga1P17095 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmga1P17095 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Hmga1P17095 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmga1P17095 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmga1P17095 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmga1P17095 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmga1P17095 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmga1P17095 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Hmga1P17095 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hmga1P17095 Gm27275-201ENSMUST00000184318 272 ntBASIC19.24■□□□□ 0.67
Hmga1P17095 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.24■□□□□ 0.67
Hmga1P17095 Gm44549-201ENSMUST00000208351 577 ntBASIC19.24■□□□□ 0.67
Hmga1P17095 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmga1P17095 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmga1P17095 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmga1P17095 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.24■□□□□ 0.67
Hmga1P17095 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hmga1P17095 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmga1P17095 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmga1P17095 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hmga1P17095 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmga1P17095 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmga1P17095 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hmga1P17095 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmga1P17095 Gm13168-201ENSMUST00000121771 632 ntBASIC19.23■□□□□ 0.67
Hmga1P17095 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.23■□□□□ 0.67
Hmga1P17095 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.23■□□□□ 0.67
Hmga1P17095 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Hmga1P17095 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hmga1P17095 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Hmga1P17095 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Hmga1P17095 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.22■□□□□ 0.67
Hmga1P17095 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hmga1P17095 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmga1P17095 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.22■□□□□ 0.67
Hmga1P17095 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hmga1P17095 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Hmga1P17095 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hmga1P17095 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmga1P17095 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmga1P17095 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmga1P17095 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmga1P17095 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmga1P17095 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmga1P17095 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmga1P17095 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.21■□□□□ 0.67
Hmga1P17095 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmga1P17095 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.21■□□□□ 0.67
Hmga1P17095 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Hmga1P17095 Dio3-201ENSMUST00000097228 1449 ntBASIC19.21■□□□□ 0.67
Hmga1P17095 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hmga1P17095 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.21■□□□□ 0.67
Hmga1P17095 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga1P17095 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga1P17095 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga1P17095 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga1P17095 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga1P17095 Gm2559-201ENSMUST00000201323 363 ntBASIC19.2■□□□□ 0.66
Hmga1P17095 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga1P17095 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.2■□□□□ 0.66
Hmga1P17095 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga1P17095 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga1P17095 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga1P17095 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Hmga1P17095 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga1P17095 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms