Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sod1P08228 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sod1P08228 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Sod1P08228 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sod1P08228 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sod1P08228 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sod1P08228 Mir1199-201ENSMUST00000117015 119 ntBASIC17.74■□□□□ 0.43
Sod1P08228 Gm11927-201ENSMUST00000118472 759 ntBASIC17.74■□□□□ 0.43
Sod1P08228 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.74■□□□□ 0.43
Sod1P08228 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sod1P08228 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sod1P08228 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sod1P08228 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Sod1P08228 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sod1P08228 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sod1P08228 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sod1P08228 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sod1P08228 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.73■□□□□ 0.43
Sod1P08228 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.73■□□□□ 0.43
Sod1P08228 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.73■□□□□ 0.43
Sod1P08228 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sod1P08228 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sod1P08228 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sod1P08228 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sod1P08228 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sod1P08228 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sod1P08228 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 Flg-201ENSMUST00000050758 1488 ntBASIC17.72■□□□□ 0.43
Sod1P08228 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.72■□□□□ 0.43
Sod1P08228 Gm22325-201ENSMUST00000158904 308 ntBASIC17.72■□□□□ 0.43
Sod1P08228 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Sod1P08228 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sod1P08228 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.71■□□□□ 0.43
Sod1P08228 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.71■□□□□ 0.43
Sod1P08228 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.71■□□□□ 0.43
Sod1P08228 Gm7977-201ENSMUST00000193787 748 ntBASIC17.71■□□□□ 0.43
Sod1P08228 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.71■□□□□ 0.43
Sod1P08228 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.71■□□□□ 0.43
Sod1P08228 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sod1P08228 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sod1P08228 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.7■□□□□ 0.42
Sod1P08228 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sod1P08228 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sod1P08228 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.7■□□□□ 0.42
Sod1P08228 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sod1P08228 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sod1P08228 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.7■□□□□ 0.42
Sod1P08228 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.7■□□□□ 0.42
Sod1P08228 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sod1P08228 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sod1P08228 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sod1P08228 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sod1P08228 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sod1P08228 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sod1P08228 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sod1P08228 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.69■□□□□ 0.42
Sod1P08228 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sod1P08228 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.69■□□□□ 0.42
Sod1P08228 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sod1P08228 Gm13836-201ENSMUST00000121159 501 ntBASIC17.69■□□□□ 0.42
Sod1P08228 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.69■□□□□ 0.42
Sod1P08228 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sod1P08228 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Sod1P08228 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Sod1P08228 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.69■□□□□ 0.42
Sod1P08228 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.69■□□□□ 0.42
Sod1P08228 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.69■□□□□ 0.42
Sod1P08228 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sod1P08228 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sod1P08228 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.69■□□□□ 0.42
Sod1P08228 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sod1P08228 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sod1P08228 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sod1P08228 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sod1P08228 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sod1P08228 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms