Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PrnpP04925 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PrnpP04925 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PrnpP04925 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PrnpP04925 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.71
PrnpP04925 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PrnpP04925 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PrnpP04925 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PrnpP04925 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PrnpP04925 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PrnpP04925 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PrnpP04925 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PrnpP04925 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PrnpP04925 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.51■□□□□ 0.71
PrnpP04925 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PrnpP04925 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PrnpP04925 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PrnpP04925 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PrnpP04925 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PrnpP04925 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PrnpP04925 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PrnpP04925 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.5■□□□□ 0.71
PrnpP04925 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.5■□□□□ 0.71
PrnpP04925 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PrnpP04925 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PrnpP04925 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PrnpP04925 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PrnpP04925 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PrnpP04925 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PrnpP04925 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PrnpP04925 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.49■□□□□ 0.71
PrnpP04925 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PrnpP04925 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PrnpP04925 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PrnpP04925 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PrnpP04925 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PrnpP04925 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PrnpP04925 Gm13836-201ENSMUST00000121159 501 ntBASIC19.49■□□□□ 0.71
PrnpP04925 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.49■□□□□ 0.71
PrnpP04925 Gm7977-201ENSMUST00000193787 748 ntBASIC19.49■□□□□ 0.71
PrnpP04925 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.49■□□□□ 0.71
PrnpP04925 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.49■□□□□ 0.71
PrnpP04925 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PrnpP04925 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PrnpP04925 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PrnpP04925 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PrnpP04925 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PrnpP04925 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PrnpP04925 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PrnpP04925 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.48■□□□□ 0.71
PrnpP04925 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PrnpP04925 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PrnpP04925 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PrnpP04925 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PrnpP04925 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PrnpP04925 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PrnpP04925 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PrnpP04925 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PrnpP04925 Flg-201ENSMUST00000050758 1488 ntBASIC19.47■□□□□ 0.71
PrnpP04925 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PrnpP04925 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PrnpP04925 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PrnpP04925 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PrnpP04925 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PrnpP04925 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PrnpP04925 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PrnpP04925 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.46■□□□□ 0.71
PrnpP04925 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.46■□□□□ 0.71
PrnpP04925 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PrnpP04925 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PrnpP04925 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PrnpP04925 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PrnpP04925 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PrnpP04925 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Mir1199-201ENSMUST00000117015 119 ntBASIC19.45■□□□□ 0.7
PrnpP04925 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.45■□□□□ 0.7
PrnpP04925 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.45■□□□□ 0.7
PrnpP04925 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms