Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd74P04441 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd74P04441 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.69■□□□□ 0.1
Cd74P04441 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd74P04441 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Cd74P04441 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd74P04441 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cd74P04441 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.68■□□□□ 0.1
Cd74P04441 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd74P04441 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.68■□□□□ 0.1
Cd74P04441 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.68■□□□□ 0.1
Cd74P04441 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.68■□□□□ 0.1
Cd74P04441 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd74P04441 Gm9988-201ENSMUST00000069786 435 ntBASIC15.68■□□□□ 0.1
Cd74P04441 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd74P04441 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd74P04441 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd74P04441 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd74P04441 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd74P04441 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cd74P04441 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cd74P04441 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cd74P04441 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cd74P04441 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Cd74P04441 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd74P04441 Gm27801-201ENSMUST00000184174 223 ntBASIC15.67■□□□□ 0.1
Cd74P04441 AV356131-201ENSMUST00000206201 750 ntBASIC15.67■□□□□ 0.1
Cd74P04441 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd74P04441 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cd74P04441 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Cd74P04441 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Cd74P04441 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cd74P04441 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd74P04441 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Gm10849-201ENSMUST00000100397 618 ntBASIC15.66■□□□□ 0.1
Cd74P04441 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.66■□□□□ 0.1
Cd74P04441 Gm26571-201ENSMUST00000181399 666 ntBASIC15.66■□□□□ 0.1
Cd74P04441 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.66■□□□□ 0.1
Cd74P04441 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd74P04441 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Cd74P04441 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cd74P04441 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd74P04441 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
Cd74P04441 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd74P04441 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cd74P04441 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cd74P04441 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd74P04441 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.64■□□□□ 0.09
Cd74P04441 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd74P04441 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd74P04441 Gm10033-202ENSMUST00000211874 928 ntBASIC15.64■□□□□ 0.09
Cd74P04441 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd74P04441 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cd74P04441 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd74P04441 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd74P04441 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd74P04441 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms