Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Tgfb1P04202 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.36■□□□□ 0.37
Tgfb1P04202 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.36■□□□□ 0.37
Tgfb1P04202 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.36■□□□□ 0.37
Tgfb1P04202 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb1P04202 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb1P04202 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb1P04202 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb1P04202 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb1P04202 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.35■□□□□ 0.37
Tgfb1P04202 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tgfb1P04202 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb1P04202 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb1P04202 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb1P04202 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb1P04202 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Tgfb1P04202 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Tgfb1P04202 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.34■□□□□ 0.37
Tgfb1P04202 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb1P04202 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb1P04202 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb1P04202 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb1P04202 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb1P04202 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tgfb1P04202 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb1P04202 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfb1P04202 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Tgfb1P04202 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfb1P04202 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb1P04202 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb1P04202 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.33■□□□□ 0.36
Tgfb1P04202 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb1P04202 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb1P04202 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb1P04202 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb1P04202 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb1P04202 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb1P04202 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb1P04202 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb1P04202 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb1P04202 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tgfb1P04202 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb1P04202 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb1P04202 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.32■□□□□ 0.36
Tgfb1P04202 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Tgfb1P04202 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb1P04202 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tgfb1P04202 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb1P04202 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb1P04202 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb1P04202 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb1P04202 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tgfb1P04202 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tgfb1P04202 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb1P04202 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb1P04202 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb1P04202 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Tgfb1P04202 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb1P04202 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.31■□□□□ 0.36
Tgfb1P04202 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb1P04202 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.31■□□□□ 0.36
Tgfb1P04202 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb1P04202 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tgfb1P04202 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Tgfb1P04202 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tgfb1P04202 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb1P04202 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb1P04202 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb1P04202 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb1P04202 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb1P04202 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb1P04202 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb1P04202 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb1P04202 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb1P04202 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb1P04202 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb1P04202 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb1P04202 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb1P04202 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb1P04202 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb1P04202 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb1P04202 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb1P04202 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.29■□□□□ 0.36
Tgfb1P04202 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb1P04202 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.29■□□□□ 0.36
Tgfb1P04202 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb1P04202 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb1P04202 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb1P04202 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb1P04202 Reep4-203ENSMUST00000226563 1444 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 196.3 ms