Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.07■□□□□ 0.32
P01852 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.07■□□□□ 0.32
P01852 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
P01852 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.06■□□□□ 0.32
P01852 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
P01852 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01852 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.05■□□□□ 0.32
P01852 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01852 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P01852 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01852 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01852 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
P01852 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.05■□□□□ 0.32
P01852 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
P01852 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01852 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01852 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01852 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01852 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
P01852 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.05■□□□□ 0.32
P01852 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
P01852 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.04■□□□□ 0.32
P01852 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
P01852 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
P01852 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01852 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
P01852 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.03■□□□□ 0.32
P01852 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01852 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
P01852 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01852 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.03■□□□□ 0.32
P01852 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01852 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.03■□□□□ 0.32
P01852 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.03■□□□□ 0.32
P01852 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.03■□□□□ 0.32
P01852 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.03■□□□□ 0.32
P01852 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01852 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01852 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01852 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01852 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
P01852 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01852 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01852 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
P01852 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01852 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.03■□□□□ 0.32
P01852 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01852 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
P01852 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01852 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
P01852 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01852 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
P01852 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P01852 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
P01852 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01852 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
P01852 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01852 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01852 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01852 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01852 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
P01852 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
P01852 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01852 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01852 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P01852 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01852 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01852 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01852 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
P01852 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01852 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms