Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.27■□□□□ 0.19
Igh-VJ558P01758 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Igh-VJ558P01758 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Igh-VJ558P01758 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Igh-VJ558P01758 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Igh-VJ558P01758 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Igh-VJ558P01758 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Igh-VJ558P01758 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igh-VJ558P01758 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igh-VJ558P01758 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Igh-VJ558P01758 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Gm13534-201ENSMUST00000121169 513 ntBASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Igh-VJ558P01758 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Gm13234-201ENSMUST00000120010 747 ntBASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.22■□□□□ 0.19
Igh-VJ558P01758 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igh-VJ558P01758 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Igh-VJ558P01758 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Igh-VJ558P01758 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igh-VJ558P01758 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Igh-VJ558P01758 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.21■□□□□ 0.19
Igh-VJ558P01758 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.21■□□□□ 0.19
Igh-VJ558P01758 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igh-VJ558P01758 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igh-VJ558P01758 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.21■□□□□ 0.19
Igh-VJ558P01758 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Igh-VJ558P01758 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igh-VJ558P01758 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Igh-VJ558P01758 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Igh-VJ558P01758 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms