Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CopeO89079 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CopeO89079 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CopeO89079 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CopeO89079 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CopeO89079 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CopeO89079 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CopeO89079 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CopeO89079 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CopeO89079 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CopeO89079 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CopeO89079 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CopeO89079 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CopeO89079 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CopeO89079 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CopeO89079 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CopeO89079 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CopeO89079 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.32■□□□□ 0.68
CopeO89079 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.32■□□□□ 0.68
CopeO89079 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CopeO89079 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CopeO89079 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CopeO89079 Rarb-207ENSMUST00000225921 2756 ntBASIC19.32■□□□□ 0.68
CopeO89079 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.32■□□□□ 0.68
CopeO89079 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CopeO89079 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CopeO89079 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
CopeO89079 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CopeO89079 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CopeO89079 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CopeO89079 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CopeO89079 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CopeO89079 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopeO89079 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopeO89079 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopeO89079 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CopeO89079 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopeO89079 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CopeO89079 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopeO89079 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopeO89079 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopeO89079 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopeO89079 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CopeO89079 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopeO89079 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopeO89079 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CopeO89079 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopeO89079 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopeO89079 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.3■□□□□ 0.68
CopeO89079 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CopeO89079 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.3■□□□□ 0.68
CopeO89079 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CopeO89079 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CopeO89079 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopeO89079 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopeO89079 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.29■□□□□ 0.68
CopeO89079 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Spcs1-204ENSMUST00000226782 949 ntBASIC19.29■□□□□ 0.68
CopeO89079 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CopeO89079 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopeO89079 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CopeO89079 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CopeO89079 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CopeO89079 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CopeO89079 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CopeO89079 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CopeO89079 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CopeO89079 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CopeO89079 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CopeO89079 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CopeO89079 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CopeO89079 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.28■□□□□ 0.68
CopeO89079 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopeO89079 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CopeO89079 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopeO89079 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
CopeO89079 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopeO89079 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopeO89079 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopeO89079 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopeO89079 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CopeO89079 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.27■□□□□ 0.68
CopeO89079 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CopeO89079 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CopeO89079 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CopeO89079 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms