Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Matn4O89029 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Matn4O89029 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Matn4O89029 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.7■□□□□ 0.42
Matn4O89029 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Matn4O89029 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Matn4O89029 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Matn4O89029 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.7■□□□□ 0.42
Matn4O89029 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Matn4O89029 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Matn4O89029 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Matn4O89029 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Matn4O89029 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Matn4O89029 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.69■□□□□ 0.42
Matn4O89029 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Matn4O89029 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Matn4O89029 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn4O89029 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.68■□□□□ 0.42
Matn4O89029 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.68■□□□□ 0.42
Matn4O89029 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Matn4O89029 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.68■□□□□ 0.42
Matn4O89029 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.68■□□□□ 0.42
Matn4O89029 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.68■□□□□ 0.42
Matn4O89029 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.68■□□□□ 0.42
Matn4O89029 Gm9847-201ENSMUST00000052528 599 ntBASIC17.68■□□□□ 0.42
Matn4O89029 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn4O89029 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Matn4O89029 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn4O89029 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.67■□□□□ 0.42
Matn4O89029 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn4O89029 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn4O89029 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Matn4O89029 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn4O89029 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.67■□□□□ 0.42
Matn4O89029 Smad6-203ENSMUST00000179458 273 ntBASIC17.67■□□□□ 0.42
Matn4O89029 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Matn4O89029 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn4O89029 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn4O89029 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.67■□□□□ 0.42
Matn4O89029 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn4O89029 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Matn4O89029 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn4O89029 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 Gm11421-201ENSMUST00000122124 294 ntBASIC17.65■□□□□ 0.42
Matn4O89029 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn4O89029 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn4O89029 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn4O89029 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Matn4O89029 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Matn4O89029 Gm27801-201ENSMUST00000184174 223 ntBASIC17.64■□□□□ 0.41
Matn4O89029 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.64■□□□□ 0.41
Matn4O89029 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Matn4O89029 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Matn4O89029 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn4O89029 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms