Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Syn1O88935 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Notumos-201ENSMUST00000151998 2659 ntBASIC19.36■□□□□ 0.69
Syn1O88935 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Syn1O88935 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.36■□□□□ 0.69
Syn1O88935 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.36■□□□□ 0.69
Syn1O88935 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.36■□□□□ 0.69
Syn1O88935 Gm30025-201ENSMUST00000218555 728 ntBASIC19.36■□□□□ 0.69
Syn1O88935 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.36■□□□□ 0.69
Syn1O88935 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Syn1O88935 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Syn1O88935 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syn1O88935 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Syn1O88935 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.35■□□□□ 0.69
Syn1O88935 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Syn1O88935 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.35■□□□□ 0.69
Syn1O88935 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syn1O88935 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syn1O88935 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Syn1O88935 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syn1O88935 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Syn1O88935 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syn1O88935 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syn1O88935 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.35■□□□□ 0.69
Syn1O88935 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syn1O88935 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syn1O88935 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syn1O88935 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Syn1O88935 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.34■□□□□ 0.69
Syn1O88935 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Syn1O88935 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syn1O88935 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syn1O88935 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syn1O88935 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syn1O88935 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Syn1O88935 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syn1O88935 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syn1O88935 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Syn1O88935 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syn1O88935 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Syn1O88935 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Syn1O88935 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Syn1O88935 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Syn1O88935 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.33■□□□□ 0.68
Syn1O88935 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Syn1O88935 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syn1O88935 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syn1O88935 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Syn1O88935 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syn1O88935 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Syn1O88935 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syn1O88935 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Syn1O88935 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Syn1O88935 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syn1O88935 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syn1O88935 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Syn1O88935 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.32■□□□□ 0.68
Syn1O88935 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.32■□□□□ 0.68
Syn1O88935 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Syn1O88935 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Syn1O88935 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Syn1O88935 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Syn1O88935 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Syn1O88935 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.31■□□□□ 0.68
Syn1O88935 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Syn1O88935 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Syn1O88935 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Syn1O88935 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.31■□□□□ 0.68
Syn1O88935 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.3■□□□□ 0.68
Syn1O88935 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syn1O88935 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syn1O88935 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syn1O88935 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Syn1O88935 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.3■□□□□ 0.68
Syn1O88935 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syn1O88935 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syn1O88935 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Syn1O88935 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syn1O88935 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syn1O88935 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syn1O88935 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syn1O88935 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syn1O88935 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syn1O88935 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syn1O88935 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syn1O88935 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.29■□□□□ 0.68
Syn1O88935 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syn1O88935 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Syn1O88935 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syn1O88935 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syn1O88935 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syn1O88935 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms