Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.57■□□□□ 0.88
Slc6a20bO88575 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Slc6a20bO88575 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20bO88575 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20bO88575 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a20bO88575 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a20bO88575 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a20bO88575 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Slc6a20bO88575 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a20bO88575 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.54■□□□□ 0.88
Slc6a20bO88575 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Slc6a20bO88575 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.53■□□□□ 0.88
Slc6a20bO88575 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Slc6a20bO88575 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20bO88575 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a20bO88575 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a20bO88575 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc6a20bO88575 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc6a20bO88575 Gm30025-201ENSMUST00000218555 728 ntBASIC20.52■□□□□ 0.88
Slc6a20bO88575 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.52■□□□□ 0.88
Slc6a20bO88575 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a20bO88575 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Slc6a20bO88575 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a20bO88575 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Slc6a20bO88575 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc6a20bO88575 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20bO88575 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20bO88575 Flg-201ENSMUST00000050758 1488 ntBASIC20.51■□□□□ 0.87
Slc6a20bO88575 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20bO88575 Gm21814-202ENSMUST00000203277 873 ntBASIC20.51■□□□□ 0.87
Slc6a20bO88575 Gm7367-201ENSMUST00000057611 492 ntBASIC20.51■□□□□ 0.87
Slc6a20bO88575 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20bO88575 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.51■□□□□ 0.87
Slc6a20bO88575 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20bO88575 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20bO88575 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.5■□□□□ 0.87
Slc6a20bO88575 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20bO88575 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms