Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.29■□□□□ 0.36
Cops4O88544 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.29■□□□□ 0.36
Cops4O88544 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.29■□□□□ 0.36
Cops4O88544 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.29■□□□□ 0.36
Cops4O88544 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.29■□□□□ 0.36
Cops4O88544 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops4O88544 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cops4O88544 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.29■□□□□ 0.36
Cops4O88544 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops4O88544 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.27■□□□□ 0.36
Cops4O88544 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops4O88544 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops4O88544 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.27■□□□□ 0.36
Cops4O88544 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops4O88544 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cops4O88544 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops4O88544 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.27■□□□□ 0.36
Cops4O88544 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.27■□□□□ 0.36
Cops4O88544 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.27■□□□□ 0.36
Cops4O88544 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops4O88544 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops4O88544 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cops4O88544 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cops4O88544 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Cops4O88544 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cops4O88544 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.27■□□□□ 0.35
Cops4O88544 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cops4O88544 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cops4O88544 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cops4O88544 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cops4O88544 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.26■□□□□ 0.35
Cops4O88544 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops4O88544 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops4O88544 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops4O88544 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cops4O88544 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.26■□□□□ 0.35
Cops4O88544 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops4O88544 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
Cops4O88544 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cops4O88544 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops4O88544 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops4O88544 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops4O88544 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops4O88544 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops4O88544 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cops4O88544 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cops4O88544 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops4O88544 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops4O88544 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops4O88544 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops4O88544 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops4O88544 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cops4O88544 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cops4O88544 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops4O88544 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.24■□□□□ 0.35
Cops4O88544 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cops4O88544 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.24■□□□□ 0.35
Cops4O88544 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.24■□□□□ 0.35
Cops4O88544 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cops4O88544 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops4O88544 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cops4O88544 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cops4O88544 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cops4O88544 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops4O88544 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops4O88544 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.23■□□□□ 0.35
Cops4O88544 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cops4O88544 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops4O88544 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops4O88544 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cops4O88544 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops4O88544 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops4O88544 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cops4O88544 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.22■□□□□ 0.35
Cops4O88544 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cops4O88544 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.22■□□□□ 0.35
Cops4O88544 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms