Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tspan6O70401 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tspan6O70401 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan6O70401 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Tspan6O70401 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Tspan6O70401 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan6O70401 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Tspan6O70401 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan6O70401 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan6O70401 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan6O70401 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan6O70401 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan6O70401 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan6O70401 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan6O70401 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.3■□□□□ 0.52
Tspan6O70401 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan6O70401 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan6O70401 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.3■□□□□ 0.52
Tspan6O70401 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan6O70401 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.3■□□□□ 0.52
Tspan6O70401 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan6O70401 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan6O70401 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tspan6O70401 Dio3-201ENSMUST00000097228 1449 ntBASIC18.3■□□□□ 0.52
Tspan6O70401 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tspan6O70401 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan6O70401 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan6O70401 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Tspan6O70401 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan6O70401 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan6O70401 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan6O70401 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.29■□□□□ 0.52
Tspan6O70401 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan6O70401 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan6O70401 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan6O70401 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.28■□□□□ 0.52
Tspan6O70401 Gm10252-201ENSMUST00000209541 832 ntBASIC18.28■□□□□ 0.52
Tspan6O70401 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tspan6O70401 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan6O70401 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tspan6O70401 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tspan6O70401 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.27■□□□□ 0.52
Tspan6O70401 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Tspan6O70401 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.27■□□□□ 0.52
Tspan6O70401 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Tspan6O70401 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tspan6O70401 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tspan6O70401 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tspan6O70401 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tspan6O70401 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Tspan6O70401 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.26■□□□□ 0.51
Tspan6O70401 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tspan6O70401 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tspan6O70401 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tspan6O70401 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tspan6O70401 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Tspan6O70401 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tspan6O70401 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tspan6O70401 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tspan6O70401 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tspan6O70401 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.26■□□□□ 0.51
Tspan6O70401 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tspan6O70401 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tspan6O70401 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tspan6O70401 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tspan6O70401 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tspan6O70401 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tspan6O70401 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tspan6O70401 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tspan6O70401 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tspan6O70401 Gm5643-201ENSMUST00000117081 966 ntBASIC18.25■□□□□ 0.51
Tspan6O70401 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.25■□□□□ 0.51
Tspan6O70401 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tspan6O70401 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tspan6O70401 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tspan6O70401 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tspan6O70401 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tspan6O70401 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tspan6O70401 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tspan6O70401 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tspan6O70401 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tspan6O70401 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tspan6O70401 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tspan6O70401 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tspan6O70401 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.24■□□□□ 0.51
Tspan6O70401 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Tspan6O70401 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Tspan6O70401 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.24■□□□□ 0.51
Tspan6O70401 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tspan6O70401 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms