Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim1O70400 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim1O70400 Gm37179-201ENSMUST00000194862 823 ntBASIC18.49■□□□□ 0.55
Pdlim1O70400 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.49■□□□□ 0.55
Pdlim1O70400 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.49■□□□□ 0.55
Pdlim1O70400 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.49■□□□□ 0.55
Pdlim1O70400 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim1O70400 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim1O70400 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim1O70400 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim1O70400 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim1O70400 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim1O70400 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim1O70400 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim1O70400 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim1O70400 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim1O70400 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim1O70400 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim1O70400 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim1O70400 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim1O70400 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim1O70400 Gm7290-201ENSMUST00000104990 617 ntBASIC18.48■□□□□ 0.55
Pdlim1O70400 Gm12918-201ENSMUST00000120234 636 ntBASIC18.48■□□□□ 0.55
Pdlim1O70400 Gm15710-201ENSMUST00000121821 636 ntBASIC18.48■□□□□ 0.55
Pdlim1O70400 Gm5075-201ENSMUST00000196916 622 ntBASIC18.48■□□□□ 0.55
Pdlim1O70400 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.48■□□□□ 0.55
Pdlim1O70400 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.48■□□□□ 0.55
Pdlim1O70400 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.48■□□□□ 0.55
Pdlim1O70400 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.48■□□□□ 0.55
Pdlim1O70400 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.48■□□□□ 0.55
Pdlim1O70400 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim1O70400 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim1O70400 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim1O70400 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim1O70400 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.47■□□□□ 0.55
Pdlim1O70400 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim1O70400 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim1O70400 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.47■□□□□ 0.55
Pdlim1O70400 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim1O70400 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim1O70400 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim1O70400 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim1O70400 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pdlim1O70400 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim1O70400 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim1O70400 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.46■□□□□ 0.55
Pdlim1O70400 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Pdlim1O70400 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim1O70400 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim1O70400 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim1O70400 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim1O70400 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim1O70400 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pdlim1O70400 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Pdlim1O70400 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim1O70400 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Pdlim1O70400 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pdlim1O70400 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim1O70400 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pdlim1O70400 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim1O70400 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pdlim1O70400 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Pdlim1O70400 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Gm12933-201ENSMUST00000120203 872 ntBASIC18.44■□□□□ 0.54
Pdlim1O70400 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.44■□□□□ 0.54
Pdlim1O70400 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.44■□□□□ 0.54
Pdlim1O70400 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.44■□□□□ 0.54
Pdlim1O70400 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.44■□□□□ 0.54
Pdlim1O70400 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.44■□□□□ 0.54
Pdlim1O70400 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pdlim1O70400 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pdlim1O70400 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim1O70400 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms