Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.69■□□□□ 0.58
Ldb2O55203 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 Gm10033-202ENSMUST00000211874 928 ntBASIC18.69■□□□□ 0.58
Ldb2O55203 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.69■□□□□ 0.58
Ldb2O55203 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.69■□□□□ 0.58
Ldb2O55203 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.69■□□□□ 0.58
Ldb2O55203 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.69■□□□□ 0.58
Ldb2O55203 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb2O55203 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb2O55203 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ldb2O55203 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb2O55203 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ldb2O55203 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb2O55203 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb2O55203 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.68■□□□□ 0.58
Ldb2O55203 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb2O55203 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb2O55203 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb2O55203 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb2O55203 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb2O55203 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ldb2O55203 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.67■□□□□ 0.58
Ldb2O55203 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.67■□□□□ 0.58
Ldb2O55203 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.67■□□□□ 0.58
Ldb2O55203 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ldb2O55203 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.67■□□□□ 0.58
Ldb2O55203 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb2O55203 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.67■□□□□ 0.58
Ldb2O55203 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb2O55203 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb2O55203 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb2O55203 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb2O55203 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Ldb2O55203 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ldb2O55203 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ldb2O55203 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb2O55203 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.66■□□□□ 0.58
Ldb2O55203 Gm42642-201ENSMUST00000200683 355 ntBASIC18.66■□□□□ 0.58
Ldb2O55203 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb2O55203 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ldb2O55203 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb2O55203 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.66■□□□□ 0.58
Ldb2O55203 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb2O55203 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb2O55203 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb2O55203 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb2O55203 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb2O55203 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb2O55203 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.65■□□□□ 0.58
Ldb2O55203 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb2O55203 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb2O55203 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb2O55203 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb2O55203 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ldb2O55203 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb2O55203 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.64■□□□□ 0.57
Ldb2O55203 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.64■□□□□ 0.57
Ldb2O55203 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb2O55203 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb2O55203 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb2O55203 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb2O55203 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb2O55203 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb2O55203 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.63■□□□□ 0.57
Ldb2O55203 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb2O55203 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb2O55203 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb2O55203 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.63■□□□□ 0.57
Ldb2O55203 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
Ldb2O55203 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb2O55203 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb2O55203 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb2O55203 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb2O55203 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb2O55203 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb2O55203 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ldb2O55203 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb2O55203 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.62■□□□□ 0.57
Ldb2O55203 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.62■□□□□ 0.57
Ldb2O55203 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb2O55203 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms