Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Prom1O54990 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Prom1O54990 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Prom1O54990 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Prom1O54990 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prom1O54990 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prom1O54990 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prom1O54990 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.76■□□□□ 0.91
Prom1O54990 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.76■□□□□ 0.91
Prom1O54990 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.76■□□□□ 0.91
Prom1O54990 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.76■□□□□ 0.91
Prom1O54990 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prom1O54990 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prom1O54990 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prom1O54990 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Prom1O54990 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prom1O54990 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prom1O54990 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.76■□□□□ 0.91
Prom1O54990 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Prom1O54990 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.75■□□□□ 0.91
Prom1O54990 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.75■□□□□ 0.91
Prom1O54990 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Prom1O54990 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prom1O54990 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Prom1O54990 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prom1O54990 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.74■□□□□ 0.91
Prom1O54990 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prom1O54990 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prom1O54990 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prom1O54990 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.74■□□□□ 0.91
Prom1O54990 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prom1O54990 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.74■□□□□ 0.91
Prom1O54990 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.74■□□□□ 0.91
Prom1O54990 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prom1O54990 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prom1O54990 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Prom1O54990 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prom1O54990 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prom1O54990 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Prom1O54990 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prom1O54990 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Prom1O54990 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.73■□□□□ 0.91
Prom1O54990 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Prom1O54990 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Prom1O54990 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prom1O54990 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prom1O54990 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prom1O54990 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prom1O54990 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prom1O54990 Gm715-201ENSMUST00000117865 831 ntBASIC20.72■□□□□ 0.91
Prom1O54990 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prom1O54990 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.72■□□□□ 0.91
Prom1O54990 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Prom1O54990 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prom1O54990 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prom1O54990 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prom1O54990 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prom1O54990 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prom1O54990 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Prom1O54990 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.71■□□□□ 0.91
Prom1O54990 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prom1O54990 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.71■□□□□ 0.91
Prom1O54990 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.71■□□□□ 0.91
Prom1O54990 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prom1O54990 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.71■□□□□ 0.91
Prom1O54990 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prom1O54990 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prom1O54990 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prom1O54990 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Prom1O54990 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Prom1O54990 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Prom1O54990 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Prom1O54990 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Prom1O54990 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Prom1O54990 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.7■□□□□ 0.9
Prom1O54990 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Prom1O54990 Gm6576-201ENSMUST00000169678 883 ntBASIC20.7■□□□□ 0.9
Prom1O54990 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.7■□□□□ 0.9
Prom1O54990 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.7■□□□□ 0.9
Prom1O54990 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prom1O54990 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prom1O54990 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prom1O54990 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prom1O54990 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prom1O54990 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prom1O54990 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prom1O54990 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prom1O54990 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prom1O54990 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms