Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Kcnu1O54982 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Kcnu1O54982 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Kcnu1O54982 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Kcnu1O54982 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.01■□□□□ 0.79
Kcnu1O54982 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kcnu1O54982 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kcnu1O54982 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kcnu1O54982 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcnu1O54982 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcnu1O54982 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20■□□□□ 0.79
Kcnu1O54982 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20■□□□□ 0.79
Kcnu1O54982 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20■□□□□ 0.79
Kcnu1O54982 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Kcnu1O54982 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcnu1O54982 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcnu1O54982 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcnu1O54982 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcnu1O54982 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcnu1O54982 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.99■□□□□ 0.79
Kcnu1O54982 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.99■□□□□ 0.79
Kcnu1O54982 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcnu1O54982 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Kcnu1O54982 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Kcnu1O54982 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.98■□□□□ 0.79
Kcnu1O54982 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Kcnu1O54982 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcnu1O54982 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcnu1O54982 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcnu1O54982 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Kcnu1O54982 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Kcnu1O54982 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Kcnu1O54982 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Kcnu1O54982 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Kcnu1O54982 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcnu1O54982 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcnu1O54982 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Kcnu1O54982 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Kcnu1O54982 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.97■□□□□ 0.79
Kcnu1O54982 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Kcnu1O54982 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.97■□□□□ 0.79
Kcnu1O54982 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Kcnu1O54982 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Kcnu1O54982 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Kcnu1O54982 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Kcnu1O54982 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Kcnu1O54982 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Kcnu1O54982 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Kcnu1O54982 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.96■□□□□ 0.79
Kcnu1O54982 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Kcnu1O54982 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Kcnu1O54982 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Kcnu1O54982 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Kcnu1O54982 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Kcnu1O54982 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Kcnu1O54982 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Kcnu1O54982 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Kcnu1O54982 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Kcnu1O54982 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Kcnu1O54982 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.95■□□□□ 0.78
Kcnu1O54982 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.95■□□□□ 0.78
Kcnu1O54982 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Kcnu1O54982 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Kcnu1O54982 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Kcnu1O54982 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Kcnu1O54982 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Kcnu1O54982 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.95■□□□□ 0.78
Kcnu1O54982 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Kcnu1O54982 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Kcnu1O54982 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Kcnu1O54982 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Kcnu1O54982 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Kcnu1O54982 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms