Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf13O54965 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.98■□□□□ 0.31
Rnf13O54965 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rnf13O54965 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf13O54965 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.98■□□□□ 0.31
Rnf13O54965 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Rnf13O54965 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rnf13O54965 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf13O54965 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf13O54965 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf13O54965 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.97■□□□□ 0.31
Rnf13O54965 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf13O54965 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf13O54965 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf13O54965 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf13O54965 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf13O54965 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf13O54965 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rnf13O54965 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rnf13O54965 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
Rnf13O54965 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rnf13O54965 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf13O54965 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rnf13O54965 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf13O54965 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.96■□□□□ 0.31
Rnf13O54965 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rnf13O54965 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rnf13O54965 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rnf13O54965 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Rnf13O54965 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf13O54965 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.96■□□□□ 0.31
Rnf13O54965 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf13O54965 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf13O54965 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.96■□□□□ 0.3
Rnf13O54965 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf13O54965 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.96■□□□□ 0.3
Rnf13O54965 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf13O54965 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf13O54965 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf13O54965 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.3
Rnf13O54965 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.95■□□□□ 0.3
Rnf13O54965 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Rnf13O54965 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.95■□□□□ 0.3
Rnf13O54965 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf13O54965 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Rnf13O54965 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.94■□□□□ 0.3
Rnf13O54965 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.94■□□□□ 0.3
Rnf13O54965 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf13O54965 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf13O54965 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.93■□□□□ 0.3
Rnf13O54965 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf13O54965 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf13O54965 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.93■□□□□ 0.3
Rnf13O54965 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf13O54965 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf13O54965 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf13O54965 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf13O54965 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Rnf13O54965 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf13O54965 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rnf13O54965 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms