Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Matn3O35701 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Matn3O35701 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Matn3O35701 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Matn3O35701 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Matn3O35701 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Matn3O35701 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Matn3O35701 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Matn3O35701 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Matn3O35701 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17■□□□□ 0.31
Matn3O35701 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Matn3O35701 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Matn3O35701 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Matn3O35701 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Matn3O35701 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Matn3O35701 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.99■□□□□ 0.31
Matn3O35701 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Matn3O35701 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Matn3O35701 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Matn3O35701 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.99■□□□□ 0.31
Matn3O35701 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Matn3O35701 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Matn3O35701 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Matn3O35701 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Matn3O35701 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.98■□□□□ 0.31
Matn3O35701 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.98■□□□□ 0.31
Matn3O35701 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Matn3O35701 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.98■□□□□ 0.31
Matn3O35701 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Matn3O35701 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.97■□□□□ 0.31
Matn3O35701 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.97■□□□□ 0.31
Matn3O35701 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Matn3O35701 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Matn3O35701 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Matn3O35701 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Matn3O35701 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Matn3O35701 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Matn3O35701 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Matn3O35701 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Matn3O35701 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Matn3O35701 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.96■□□□□ 0.31
Matn3O35701 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Matn3O35701 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Matn3O35701 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Matn3O35701 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Matn3O35701 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Matn3O35701 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Matn3O35701 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Matn3O35701 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Matn3O35701 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Matn3O35701 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.95■□□□□ 0.3
Matn3O35701 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Matn3O35701 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.95■□□□□ 0.3
Matn3O35701 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.95■□□□□ 0.3
Matn3O35701 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Matn3O35701 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Matn3O35701 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Matn3O35701 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms