Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Lhx8O35652 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lhx8O35652 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lhx8O35652 Gm42660-201ENSMUST00000197733 947 ntBASIC18.08■□□□□ 0.48
Lhx8O35652 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lhx8O35652 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.08■□□□□ 0.48
Lhx8O35652 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
Lhx8O35652 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lhx8O35652 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lhx8O35652 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx8O35652 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx8O35652 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx8O35652 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx8O35652 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.07■□□□□ 0.48
Lhx8O35652 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.07■□□□□ 0.48
Lhx8O35652 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx8O35652 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx8O35652 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.07■□□□□ 0.48
Lhx8O35652 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx8O35652 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.07■□□□□ 0.48
Lhx8O35652 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lhx8O35652 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx8O35652 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx8O35652 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx8O35652 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.06■□□□□ 0.48
Lhx8O35652 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.06■□□□□ 0.48
Lhx8O35652 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lhx8O35652 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.06■□□□□ 0.48
Lhx8O35652 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.06■□□□□ 0.48
Lhx8O35652 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.06■□□□□ 0.48
Lhx8O35652 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx8O35652 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx8O35652 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx8O35652 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lhx8O35652 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.05■□□□□ 0.48
Lhx8O35652 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx8O35652 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.05■□□□□ 0.48
Lhx8O35652 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
Lhx8O35652 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.05■□□□□ 0.48
Lhx8O35652 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.05■□□□□ 0.48
Lhx8O35652 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
Lhx8O35652 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lhx8O35652 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lhx8O35652 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx8O35652 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx8O35652 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Lhx8O35652 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx8O35652 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx8O35652 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.04■□□□□ 0.48
Lhx8O35652 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.04■□□□□ 0.48
Lhx8O35652 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx8O35652 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx8O35652 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Lhx8O35652 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.03■□□□□ 0.48
Lhx8O35652 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx8O35652 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.03■□□□□ 0.48
Lhx8O35652 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx8O35652 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC18.03■□□□□ 0.48
Lhx8O35652 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx8O35652 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lhx8O35652 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx8O35652 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lhx8O35652 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lhx8O35652 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx8O35652 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx8O35652 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx8O35652 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lhx8O35652 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lhx8O35652 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.02■□□□□ 0.48
Lhx8O35652 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lhx8O35652 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lhx8O35652 Gm13836-201ENSMUST00000121159 501 ntBASIC18.02■□□□□ 0.48
Lhx8O35652 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lhx8O35652 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Lhx8O35652 Gm40848-201ENSMUST00000221998 324 ntBASIC18.02■□□□□ 0.48
Lhx8O35652 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms